Common subdirectories: taxonomy_menu/po and taxonomy_menu_new/po
diff -upN taxonomy_menu/taxonomy_menu.module taxonomy_menu_new/taxonomy_menu.module
--- taxonomy_menu/taxonomy_menu.module	2008-01-31 11:23:34.000000000 -0500
+++ taxonomy_menu_new/taxonomy_menu.module	2008-08-11 14:30:00.000000000 -0400
@@ -138,4 +138,9 @@ function taxonomy_menu_taxonomy() {
 
 function taxonomy_menu_term_path(&$term) {
   return 'asdf';
-}
\ No newline at end of file
+}
+
+/**
+ * Include pathauto & token functions for taxonomy_pathauto
+ */
+require_once(drupal_get_path('module', 'taxonomy_menu') .'/taxonomy_menu_pathauto.inc');
\ No newline at end of file
diff -upN taxonomy_menu/taxonomy_menu_pathauto.inc taxonomy_menu_new/taxonomy_menu_pathauto.inc
--- taxonomy_menu/taxonomy_menu_pathauto.inc	1969-12-31 19:00:00.000000000 -0500
+++ taxonomy_menu_new/taxonomy_menu_pathauto.inc	2008-08-11 15:40:00.000000000 -0400
@@ -0,0 +1,128 @@
+<?php
+// $Id: taxonomy_menu_pathauto.inc,v 1.0 2008/08/11 12:29:59 q0rban Exp $
+
+/*
+ * Implementation of hook_pathauto() for taxonomy module
+ */
+function taxonomy_menu_pathauto($op) {
+  switch ($op) {
+    case 'settings':
+      $settings = array();
+      $settings['module'] = 'taxonomy_menu';
+      $settings['token_type'] = 'taxonomy_menu';
+      $settings['groupheader'] = t('Taxonomy Menu path settings');
+      $settings['patterndescr'] = t('Default path pattern (applies to all vocabularies with blank patterns below)');
+      $settings['patterndefault'] = '[tax-menu]/[vocab-raw]/[cat-raw]';
+      $patterns = token_get_list('taxonomy_menu');
+      foreach ($patterns as $type => $pattern_set) {
+        if ($type != 'global') {
+          foreach ($pattern_set as $pattern => $description) {
+            $settings['placeholders']['['. $pattern .']'] = $description;
+          }
+        }
+      }
+      $settings['bulkname'] = t('Bulk generate aliases for Taxonomy Menu items');
+      $settings['bulkdescr'] = t('Generate aliases for all existing Taxonomy Menu items.');
+
+      $vocabularies = taxonomy_get_vocabularies();
+      if (sizeof($vocabularies) > 0) {
+        $settings['patternitems'] = array();
+        $forum_vid = variable_get('forum_nav_vocabulary', '');
+        foreach ($vocabularies as $vocab) {
+          if ($vocab->vid != $forum_vid) {
+            $vocabname = $vocab->name;
+            $fieldlabel = t('Pattern for all %vocab-name paths', array('%vocab-name' => $vocabname));
+            $settings['patternitems'][$vocab->vid] = $fieldlabel;
+          }
+        }
+      }
+      return (object) $settings;
+
+    default:
+      break;
+  }
+}
+
+/**
+ * Generate aliases for all categories
+ */ 
+function taxonomy_menu_pathauto_bulkupdate() {
+  $count = 0;
+  foreach (taxonomy_get_vocabularies() as $category) { 
+    // The Base Vocabulary path
+    $path =  variable_get('taxonomy_menu_display_page', 'category') .'/'. $category->vid;
+  
+    $tree = taxonomy_get_tree($category->vid);
+    $old_depth = -1;
+    $old_path = $path;
+  
+    foreach ($tree as $term) {
+      // get the tokens and values for this term   
+      $placeholders = pathauto_get_placeholders('taxonomy_menu', $term);
+
+      if ($term->depth <= $old_depth) {
+        $slashes_to_remove = $old_depth - $term->depth + 1;
+        for ($i = 0; $i < $slashes_to_remove; $i++) {
+          $old_path = substr($old_path, 0, strrpos($old_path, '/'));
+        }
+      }
+      $path       = $old_path .'/'. $term->tid;
+      $old_depth  = $term->depth;
+      $old_path   = $path;
+  
+      if ($alias = pathauto_create_alias('taxonomy_menu', 'bulkupdate', $placeholders, $path, $term->tid, $category->vid)) {
+        $count++;
+      }
+    }
+  
+    while ($category = db_fetch_object($result)) {
+      $count += _taxonomy_pathauto_alias($category, 'bulkupdate');
+    }
+    
+    drupal_set_message(format_plural($count,
+      "Bulk generation of terms completed, one alias generated.",
+      "Bulk generation of terms completed, @count aliases generated.")
+    );
+  }
+}
+
+/**
+ * Implementation of hook_token_values()
+ */
+function taxonomy_menu_token_values($type, $object = NULL, $options = array()) {
+  $values = array();
+  switch ($type) {
+    case 'taxonomy_menu':
+      $category = $object;
+
+      $vid = $category->vid;
+      $vocabulary = taxonomy_get_vocabulary($vid);
+      $values['tax-menu'] = variable_get('taxonomy_menu_display_page', 'category');
+      $values['vid'] = $vid;
+      $values['vocab'] = check_plain($vocabulary->name);
+      $values['cat'] = check_plain($category->name);
+      $values['tid'] = $category->tid;
+      $values['vocab-raw'] = $vocabulary->name;
+      $values['cat-raw'] = $category->name;
+
+      break;
+  }
+  return $values;
+}
+
+/**
+ * Implementation of hook_token_list()
+ */
+function taxonomy_menu_token_list($type = 'all') {
+  if ($type == 'taxonomy_menu' || $type == 'all') {
+    $tokens['taxonomy_menu']['tax-menu'] = t("The first item on the menu as defined <a href='@tax_menu_settings'>here</a>.", array('@tax_menu_settings' => url('admin/settings/taxonomy_menu')));
+    $tokens['taxonomy_menu']['vid'] = t("The id number of the category's parent vocabulary.");
+    $tokens['taxonomy_menu']['vocab'] = t("The vocabulary that the page's first category belongs to.");
+    $tokens['taxonomy_menu']['cat'] = t('The name of the category.');
+    $tokens['taxonomy_menu']['tid'] = t('The id number of the category.');
+    $tokens['taxonomy_menu']['vocab-raw'] = t("The unfiltered vocabulary that the page's first category belongs to. WARNING - raw user input.");
+    $tokens['taxonomy_menu']['cat-raw'] = t('The unfiltered name of the category. WARNING - raw user input.');
+
+    return $tokens;
+  }
+}
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