Assign menu minipanels to a custom menu

I have two menus on the front page of a site I'm working on that needed two menus, one from primary links and one from a custom menu. I set everything up correctly, but I would get a javascript error every time I would try to add a minipanel to the custom menu. A closer look revealed that this module only works with primary or secondary links. I've implemented a hard-coded fix (look below), but I'm not sure how to have the plugin look for ANY custom menus (not just the resources menu I reference below). Thoughts?

Starting at line 60 of menu_minipanels.module:

  // Most themes will call primary and secondary links on every page.
  // They are usually themed by a function call inside page.tpl.php so we can't wait until theme_links is called,
  // because by that time, $closure has already been created, and therefore our code would not be included.
  // Therefore, we ought to load any mini panels primary and secondary links may have.
  $theme_settings = theme_get_settings();
  $primary_links = $theme_settings['toggle_primary_links'] ? menu_primary_links() : array();
  menu_minipanels_preprocess_links_at_init($primary_links);
  $secondary_links = $theme_settings['toggle_secondary_links'] ? menu_secondary_links() : array();
  menu_minipanels_preprocess_links_at_init($secondary_links);
  
  //Added by @kaynenh to use a custom menu
  $custom_menu = menu_navigation_links("menu-resources");
  menu_minipanels_preprocess_links_at_init($custom_menu);