Context overrides toggle_primary_links / toggle_secondary_links setting

while evaluating this module I noticed that it when using the active menu path selection, it overrides the theme settings for showing a menu.

I feel it should only show the relevant menu if the following return true:
primary : theme_get_setting('toggle_primary_links')
secondary : theme_get_setting('toggle_secondary_links')

I don't currently use secondary links, instead I use a drop down, and this module interferes and shows the secondary menu.

Thanks

Ben